The Human Cell Atlas is an ambitious project that aims to map the transcriptome of all the cell types in the human body. This effort relies on single cell data generated from hundreds of labs across the globe, which will be combined together into one comprehensive reference atlas. The Data Portal helps to coordinate the data produced and standardise the format of data and metadata, to reduce the burden of the integration efforts.
In this webinar we will provide an overview of data generation for HCA and how the data is curated for the Data Portal. We will demonstrate how to navigate the Data Portal to find data that can be used for integration, or as controls for your studies, how to access the data, and how to find the latest data from the integration efforts.
Who is this course for?
This webinar is suitable for any student or researcher in life sciences who is interested in working with single cell transcriptomics data. No prior knowledge of bioinformatics is required.
This event is part of a webinar series - Molecular building blocks of life - showcasing the EMBL-EBI resources that provide data and tools for studying molecular building blocks of life at molecular level such as metabolites, DNA/RNA, proteins, and at systems level such as cells.
Outcomes
By the end of the webinar you will be able to:
Navigate the HCA data portal
Recognise the the curation process used for the data portal
Access and download data from the HCA data platform
This webinar was recorded on 15 November 2023. The slides are available on the EMBL-EBI Training website: www.ebi.ac.uk/...
Негізгі бет Accessing single cell transcriptome data with the Human Cell Atlas Data Portal
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