Manipulating the anndata object is fundamental to single-cell analysis using scanpy in python. I show several basic and advanced methods to filter and subset your single-cell data based on different scenarios. These skills are necessary for single-cell and general data analysis in python.
0:00 Intro
0:31 Basic filtering
6:45 Custom filtering
9:50 Gene-based filtering
Негізгі бет Guide to filtering and subsetting single-cell anndata and pandas objects | basic and advanced
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