I'd like to thank you very much for making this tutorial video. I'm just starting my PhD in biological sciences, and our first orientation week has R Bootcamp every morning for a few hours. You've really helped me re-visit these concepts and helped me understand them. Please continue your efforts, they are greatly appreciated.
@MariaNattestad
8 жыл бұрын
So glad to hear that! Good luck with your PhD :)
@funwithflags7506
2 жыл бұрын
did you get your phd
@cornelia7800
3 жыл бұрын
Hey Maria, thank you very much, you are awsome. I started my masters thesis and I am very thankful for your well explained videos. Keep it going! All the best
@bugman3165
2 жыл бұрын
Thanks great video. Could you cover some ANOVA examples, thanks.
@AmarReddy-marpadga
6 жыл бұрын
Nice video and you clearly explained for the biologists interested in using R for data visulaization
@km2052
4 жыл бұрын
thx,very useful , need similar videos with more scope , like RNA-seq analysis , thanks a lot maria , your explanation is aimple and effective
@kyshark1
8 жыл бұрын
Hi Maria, you are a great teacher. I love your videos on R and I have learnt quite a lot. Do you have any plans to make a series on Bioconductor (and how to deal with RNAseq data analysis)?
@MariaNattestad
8 жыл бұрын
Thank you! It is awesome to hear that these videos are useful to you. I've been thinking about making more videos, but I am not sure where to start since my research has been more about PacBio sequencing analysis, structural variants, and some visualization tools. So I haven't dug into RNA-seq very deeply yet. What do you want to learn about Bioconductor and RNA-seq? Any specific questions I could answer? Thanks!
@kyshark1
8 жыл бұрын
Hi Maria. I was thinking just the basics like importing FASTAQ and doing some differential expression (DESeq2), visualising the DE results in heatmaps and stuff like that. I think there are some tutorials on KZitem but not in any order (and from your series I can see that you arrange your videos in a very logical fashion which makes learning relatively easy!). I'm not a computational biologist by training but have developed a serious interest in R and Python programming and have been learning mostly online and your videos have definitely helped me grasp ggplot2! Thanks a lot for your hard-work :)
@MariaNattestad
8 жыл бұрын
Very helpful, thank you! When I get a chance to make more videos I'll see what I can do :)
@durian7
6 жыл бұрын
Hi maria, you explained quite well, if possible please share some explanatory videos on heatmap using r studio! Thanks
@davidw.9711
5 жыл бұрын
could you possibly (plzz) upload both files? great effort!
@a.e.mahamedi4721
4 жыл бұрын
Thank you so much for the very useful video.
@CharleneMuchunu
5 жыл бұрын
This was really helpful. Thank you
@ttnot2005
4 жыл бұрын
This was really helpful, thanks very much for your time, would you please do some tutorial on big data, like genome data please !
@Thyagohills
8 жыл бұрын
Thank you so much for the videos. They're really helpful. Looking forward for Bioconductor, if you may.
@mouenpiau6913
5 жыл бұрын
Thanks for the video, I'm a beginner in R studio
@aishwaryaarya2725
5 жыл бұрын
really explanatory. thank you. Really helpful .
@CuriousKitchen
8 жыл бұрын
I have just started working on R, and by far, your tutorial videos have been the best help. Thank you so much for your great videos. I have one question. I am trying to plot a violin plot with three fields (x (numerical), y(numerical), and type(string)). I can't seem to plot them by xy and group them by type. Any suggestion? Thanks.
@MariaNattestad
8 жыл бұрын
Hmm, for a violin plot there is a distribution across a numerical variable, and you can separate these by one or more categorical variables (using x= for the first set of violins and facet_grid for additional splitting). How do you want to use the two numerical variables? One of them can be the actual distribution variable, but if you want to use the other numerical variable to separate the data into different violins, then you can make a third variable that is categorical and represents different segments of the numerical variable. For instance using a third boolean variable: y < 20 and y >=20 would be split into 2 different violins. Does that help?
@CuriousKitchen
8 жыл бұрын
Thank you so much Maria. So, basically I want to use the two numerical variables as x y but group them by factors. The columns are "Distance", "Likelihood", and "Factors". My data looks like this - Distance, Likelihood, Factors 12.06, 0.5, Forests 40, 0.66, Railways 10.1, 0.1, Highways
@MariaNattestad
8 жыл бұрын
So do you want a violin plot for distance and another one for likelihood? Then you can just make the plots separately. They will need different y-axes. So you can make one plot that is aes(x=distance, fill=factors) and another that is aes(x=likelihood, fill=factors). Note that only something like a scatterplot (geom_point) will let you show the relationship between likelihood and distance because they are both numerical and the violin plot can only show one numerical variable at a time. Good luck and thanks for the nice comment! Glad the videos are helping you get started with R :)
@CuriousKitchen
8 жыл бұрын
Maria Nattestad Thank you so much Maria. That is exactly what I need. Really appreciate your help. I hope there will be many lessons ahead.
@MariaNattestad
8 жыл бұрын
awesome, glad I could help. Good luck!
@hebamohammed2517
2 жыл бұрын
Is it possible to explai how to use RRHO analysis
@seannguyen2225
8 жыл бұрын
This was really helpful, thanks!
@arielleaiken
7 жыл бұрын
thank you! you are a great educator :)
@rpgajula
8 жыл бұрын
thank you, this is very helpful.
@arsheedganaie6296
6 жыл бұрын
can you please provide us a class room training. We are ready to pay.
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