Thank you very much, your tutorial saved me after hours trying to figure out how to do it only with the Package documentation.
@MohammadHosseini7681
Жыл бұрын
The video and tutorial were incredibly helpful to me, and I am sincerely grateful for your assistance. I genuinely hope that you achieve great success in all aspects of your life.
@marianelazambrano8463
Жыл бұрын
THANK YOU SO MUCH! This is just what I needed! So helpful
@kimiaslk9348
4 ай бұрын
your videos have saved my life so many times, you are brilliant, thank you so much !
@jawad7776
Жыл бұрын
Beautiful, informative and talentedly presented as usual....
@AyrodsGamgam
Жыл бұрын
Another gem! Thank you so much. I have a request: could you please show us an example of how to use supervised and unsupervised Machine Learning in R using biological datasets. Thanks a lot.
@mykia9910
Жыл бұрын
This is exactly what I needed! Thank you so much!
@zhww2063
Жыл бұрын
This is really helpful!!!!!! Thank you so much for this!!!!!!
@EKgenetics
8 ай бұрын
Nice and clean codes ... thank you so much. So i have a question for sure. Are the numbera in the unstranded colum exactly the same as RNAseq count that i searching for it ?
@user-cp5yf1mx7c
9 ай бұрын
This has helped me so much! Question though, how do you filter by Stage type?
@fs7463
5 ай бұрын
There is a problem about data. Retrieved data were not same with the data downloaded directly from gdc data portal. Incosistent
@user-sv3si7lm7d
Жыл бұрын
very useful ! It's extremaly useful !!!
@amtd3808
6 ай бұрын
Ma'am is there any QnA forum where could I ask doubts about ur previous videos??
@researchonfungi3232
Жыл бұрын
Hi ,You videos are extreamly helpful. I have my RNA seq data.How can I able to generate RNA editing data by using freetool like SPRINT. Could you please make a video of that "HOW TO GENERATE RNA EDITING DATA"?
@ahmedal-mammari9639
Жыл бұрын
Thank you so much great video
@iheartmcyrus
Жыл бұрын
Thank you for this tutorial. Do you have any tips for using the TCGAbiolinks package for gene expression analysis across TCGA projects? I.e. looking at different gene expression levels
@mostafaismail4253
Жыл бұрын
can you make a tutorial about the BS-seq ?, 1- how the data of BS-seq looks LIKE?, HOW we can do the downstream analysis part of it?, stuff like these.!
@sunilbhardwaj5252
Жыл бұрын
how do you find that how to use new packages and how to use them? waiting for your kind reply.
@aditimehta4886
Жыл бұрын
I wanted to ask the same question. Amazing tutorial! I just loveee the way you explain :)
@user-rj3pm2jh5o
10 ай бұрын
the video was very usefull. iam encountering an issue while downloading upto query build it went fine. for this download.file(query_TCGA) iam getting an error of Error in download.file(query_TCGA) : argument "destfile" is missing, with no default. how to solve this
@Hartecky
Жыл бұрын
Hello, thank you for this great tutorial. Following it step by step I would like to obtain not only gene expression data, but also transcript expression together with different transcripts, that can occur from the same gene. Is there any possibility to do this via TCGAbiolinks? There is an option in GDCquery(), which can be set to Isoform Expression Quantification, however it returns data for miRNA expression instead of transcripts isoforms. Thanks in advance for you reply!
@bhawanisingh-wz6gr
Жыл бұрын
Mam, how can I download the biochemical profile of the patients for a specific disease? like if I am interested in studying their biochemical profile such as BUN or Creatinine level in the blood? if not through TCGA is there any database to download the clinical profiles of the patients
@user-sv3si7lm7d
Жыл бұрын
I love you!!!
@kuldeepmakwana7242
Жыл бұрын
Hi! I have a little different question to ask. How can I create an Anndata object file from Seurat object to then run ran velocity estimation?
@azamazimi-bl7bd
Жыл бұрын
How i can do preparing function on saved and downloaded data? With which function i can do it?
@shobhitashah1929
Жыл бұрын
Can you please make a tutotial representing whole exome using mutect2
@codewithme_1988
Жыл бұрын
Hello, Can you cover Riboseq data analysis
@idmanic
Жыл бұрын
hi do you have a tutorial for copy number data?
@kasmikaborah
9 ай бұрын
Is TCGA unstranded data are raw count data?
@deepikasharma1530
Жыл бұрын
mam i am not able to download TCGA biolinks. My r is showing the following error "Error in library(TCGABiolinks) : there is no package called ‘TCGABiolinks’"
@Bioinformagician
Жыл бұрын
The name of the library is "TCGAbiolinks", b in biolinks is lowercase. Ensure this library is installed before loading the library.
@mariajosecardenasespinosa9422
Жыл бұрын
Hi, do you have a tutorial related to cellchat?
@MK-wz2xo
10 ай бұрын
Hi mam, i am facing problems when GDCprepare for the maf as I want all cases. Can you advice me on how to fix it? Million thanks!!! > maf_mutation
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